CDS
| Accession Number | TCMCG051C46483 |
| gbkey | CDS |
| Protein Id | XP_002324341.2 |
| Location | complement(join(1337283..1337551,1337781..1337947,1338164..1338966,1339055..1339279,1339564..1339701,1339784..1339868,1339983..1340041,1340430..1340651,1341111..1341182,1341441..1341553,1341779..1341944,1342050..1342169,1342286..1342438,1342529..1342589,1343180..1343225,1343394..1343529,1343640..1343714)) |
| Gene | LOC7465430 |
| GeneID | 7465430 |
| Organism | Populus trichocarpa |
Protein
| Length | 969aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_002324305.3 |
| Definition | protein RRC1 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | U2 snRNP-associated SURP motif-containing |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12842
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGAGTTCTTTCTCCATCACGAGAAAAAAGACTCCATTCCAGAAGCATAGAGAGGAAGAAGAGGCGAGGAAAAAGAGAGCGGAGGATGAAACAGCTCGTTTGTATGCGGAGTTTGTGGAGTCGTTTCAAGGGGATAATGCGCCCGGATCAAAGACTTTTGTTCGAGGTGGAACTATCAATCCCAATGAGAAATTGAAGATTGATTCTAAAGGTGAAAAGTCGAAAGATGGGGTATCTGTTCCAAAGAAGGGAAGTAGGTATGTTCCATCTTTCATACCACCTCCTATGGCATCCAAGGGAAAAGAACTTGAGAAGAAGAGGGAGGAGGAGAGACCAAAGGAGAAGGAAAAGGGAAAGACTCGAAACATAGATCATTTTATGGAGGAGCTGAAGCATGAACATGAGATGAGGGAGAGGCGAAATCAAGAACGGGAACATTGGCGCGAAGGGCGCCATAATGAAAGTTCTGCACCATCTAGTCGTTTTGATGAACTACCTGATGACTTTGATCCAAGTGGAAAGCTGCCTGGATCATTTGATGACGTTGATCCACAAACCACGAATCTTTATGTTGGGAATCTTTCACCACAGGTCGATGAGAATTTTCTTCTGAGAACTTTTGGAAGATTTGGACCCATAGCTAGTGTGAAGATAATGTGGCCCAGGACAGAAGAAGAGCGGAGACGGCAAAGAAACTGTGGATTCGTAGCATTCATGAATAGAGTTGATGGGCAGGCTGCAAAGGATGAAATGCAAGGAGTTGTTGTGTATGAATATGAGTTGAAAATTGGGTGGGGAAAATCCGTGGCTCTTCCATCACAGGCATTACCTGCTCCACCACCTGGACAAATGGCTATTAGGAGTAAAGAGGGTGCCACTGTGATTCTCTCTGGTCCATCAGGTCCACCAGTCACCTCTGTCCCAAATCAGAACTCTGAACTGGTTCTTACTCCAAATGTTCCTGATATAATGGTTGCTCCACCTGAGGATGATCACCTCCACCATATGATTGATACAATGGCTCTATATGTTCTTGATGGAGGATGTGCTTTTGAACAAGCTATCATGCAAAGGGGTCGTGGGAATCCTCTTTTCAACTTCTTGTTTGAGCTTGGATCAAAAGAACATACTTATTATGTTTGGAGGCTCTATTCTTTTGCTCAGGGTGATACTCTTCAAAGGTGGCGAACAGAGCCTTTTATCATGATAACTGGTAGCGGAAGATGGGTGCCACCACCTCTGCCCACAGCAAAGAGCCCGGAGCATGAAAAGGAGTCTGGTAGTACATATGCTGCTGGAAGAAGCAGGCGAGTTGACTCTGAAAGAACACTGACTGATCCACAAAGGGATGAGTTTGAGGATATGTTGCGTGCATTAACATTGGAAAGAAGTCAGATAAAGGATGCTATGGGTTTTTCCTTGGATAATGCTGATGCTGCAGGAGAGGTAGTTGAAGTTCTGACAGAATCTTTGACACTTAAAGAAACTCCCATTCCAACGAAAGTTGCAAGACTCATGCTTGTCTCTGACATCCTTCATAATAGTAGTGCTCCTGTAAAAAATGCATCTGCATATCGCACTAAGTTTGAAGCTGCTCTACCTGACATAATGGAAAGCTTCAATGACTTGTATCGTAGTATAACTGGAAGGATTACTGCTGAGGCCCTTAAGGAACGGGTTCTGAAAGTGTTGCAAGTATGGTCAGATTGGTTTCTGTTTTCAGATGCATATGTGAATGGACTACGGGCTACTTTTCTACGTTCTAGTAACTCTGGTGTGATCCCTTTTCATTCTATATGTGGTGATGCACCCGAAATAGAGAAAAAGAGTAGTTCAGAAGACGCAGTTGAAGGGGCAAAGATCAATCAAGATGCTGCATTAGCAATGGGCAAAGGAGCAGCTGTGAAGGAGCTAATGAATCTTCCTCTTGCTGAGTTGGAAAGACGTTGCAGACATAATGGATTGTCGCTTGTTGGTGGTAGAGAGATGATGGTGGCACGATTGCTGAGCCTGGAAGAGGCAGAAAGACAAAGGGGATATGAATTAGATGATGACTTGAAAATTGCTCAGAGCAATTCAAGTTCCAGTAGATATTCAAGTGTTCACAGAGAAATGAATGTTGAAGCAGAGCCAGTGGGATCGACAGGGTGGAATGTTTATGGGGAGGATGAGATGCCATCTCAGAACAAAGGGTCTGTATCTGTGGCTTCAACCCTCCTGATTAAGCAACCTGAACTAAAAGCCTTTGCTAAGAAAGAGAAGAACGATCCTGTTCTGCCAGCATCTAAATGGGCTAGAGATGATGATGAAAGTGACGATGAACAAAAGAGAAGTGCTAGGGATCTCGGGTTGAGCTACTCATCTTCTGGAAGTGAAAATGCTGGTGATGGTCAAGGTAAGGCAGATGAAATGGAATTCGCAACTGATGCAAACATTCCAACACAACCTGATAGTGGAATGAACGAAGAGCAGAGACAAAAATTGAGACGTTTGGAAGTTGCTTTAATTGAGTATCGTGAATCCCTTGAGGAGCGAGGAATGAAAAGTTCAGTGGAAATTGAGGGGAAAGTTGCAATACATCGGAAATGGCTGGAGTCTGAATATGGCTTATCAAGTTCTAATGAAGATGTCACTAGCAAAAAGAGCATATCTTCTGAAAGGAGGGATAGACGTAGTGATAATCATGATTCTTCAAGAAAGCGACACCGCAATGAAAGCAGAAGTGAAAGCCCGCAACGAAAATTATCACTTAGGGACAGGGAGAGGGGAAATGACTCAACAGGGGACCGGGAAGGGCATAGGGAGAGATTGGAAAGTGAAAGACGGGACCGTGATCGCCGGGAAAAGAGTGGAAGCAGAGAGCTGGATGATCATGACAGAAGCAGGGACAGGAGGAGACGCGTAAAATGA |
| Protein: MSSFSITRKKTPFQKHREEEEARKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNEKLKIDSKGEKSKDGVSVPKKGSRYVPSFIPPPMASKGKELEKKREEERPKEKEKGKTRNIDHFMEELKHEHEMRERRNQEREHWREGRHNESSAPSSRFDELPDDFDPSGKLPGSFDDVDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRVDGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGQMAIRSKEGATVILSGPSGPPVTSVPNQNSELVLTPNVPDIMVAPPEDDHLHHMIDTMALYVLDGGCAFEQAIMQRGRGNPLFNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWVPPPLPTAKSPEHEKESGSTYAAGRSRRVDSERTLTDPQRDEFEDMLRALTLERSQIKDAMGFSLDNADAAGEVVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEAALPDIMESFNDLYRSITGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRATFLRSSNSGVIPFHSICGDAPEIEKKSSSEDAVEGAKINQDAALAMGKGAAVKELMNLPLAELERRCRHNGLSLVGGREMMVARLLSLEEAERQRGYELDDDLKIAQSNSSSSRYSSVHREMNVEAEPVGSTGWNVYGEDEMPSQNKGSVSVASTLLIKQPELKAFAKKEKNDPVLPASKWARDDDESDDEQKRSARDLGLSYSSSGSENAGDGQGKADEMEFATDANIPTQPDSGMNEEQRQKLRRLEVALIEYRESLEERGMKSSVEIEGKVAIHRKWLESEYGLSSSNEDVTSKKSISSERRDRRSDNHDSSRKRHRNESRSESPQRKLSLRDRERGNDSTGDREGHRERLESERRDRDRREKSGSRELDDHDRSRDRRRRVK |